bioRxiv MCP Server
by JackKuo666
The bioRxiv MCP Server bridges AI assistants and bioRxiv's preprint repository through the Model Context Protocol (MCP). It enables AI models to search for biology preprints and access their metadata programmatically.
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What is bioRxiv MCP Server?
The bioRxiv MCP Server is a tool that allows AI assistants to search and access bioRxiv papers through a simple MCP interface. It acts as a bridge between AI models and bioRxiv's preprint repository, enabling programmatic access to biology preprints and their metadata.
How to use bioRxiv MCP Server?
To use the server, first install it using the provided instructions (either by cloning the repository or via Smithery). Then, start the server using python biorxiv_server.py. You can then use an AI assistant with MCP support to query the server using the provided tools, such as search_biorxiv_key_words and get_biorxiv_metadata.
Key features of bioRxiv MCP Server
Paper Search: Query bioRxiv papers with keywords or advanced search
Efficient Retrieval: Fast access to paper metadata
Metadata Access: Retrieve detailed metadata for specific papers
Research Support: Facilitate biological sciences research and analysis
Use cases of bioRxiv MCP Server
Researchers can use AI assistants to quickly find relevant preprints.
AI models can access metadata to improve their understanding of biological research.
Automated analysis pipelines can be built to process bioRxiv preprints.
Facilitating literature reviews and staying up-to-date with the latest research.
FAQ from bioRxiv MCP Server
What is MCP?
What is MCP?
MCP stands for Model Context Protocol. It's a standard for allowing AI models to access external data sources.
What is bioRxiv?
What is bioRxiv?
bioRxiv is a preprint server for biology, allowing researchers to share their work before peer review.
What are the system requirements?
What are the system requirements?
The server requires Python 3.10+ and the FastMCP library.
How do I install the server?
How do I install the server?
You can install the server by cloning the repository and installing the dependencies, or by using Smithery.
Is this tool free to use?
Is this tool free to use?
Yes, this tool is licensed under the MIT License and is free to use for research purposes.